Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921348.1_cds_XP_016470338.1_62799
CDS Infomation

[gene=LOC107792615] [db_xref=GeneID:107792615] [protein=E3 ubiquitin-protein ligase MBR2-like] [protein_id=XP_016470338.1] [location=complement(join(73648..73779,73899..74042,74116..74214,75021..75071,75860..77596))] [gbkey=CDS]
Sequence

ATGCAAGGGCAACAAAGTACCATCGGTTCATTTTCAGAAACTTTAGATTTTGGTTCTACT
TCAACATCGGGTGATGGTATAGATCAGCAGATGTGCTGGAATAGTCGTGTACCAGATTAT
GTGGTATCACCTAATGAGAATAATATTTCTTTTCTTAATCCTGTGAGCCAAGAGAGACGG
AACATAATGGGGTGGGGTTTAGGAGAACCGAGCTCCACAAATCATGCTGGTCAGAGTGAA
CGGAAAAGAGATCATGGTTGGTCATCTACAATGAATGCATTTCCGGAACCTTCTCACTTC
TCTGACGAACATCAATATGGGTCGCCCAACATTCTTTCATTGAGTAATGTAGAAGTAAAT
TTGAACAGTGTGCAGATGGCTAACAGCAGTATATTCTCTCAAGGTTCTAGTCCAGCTACC
CTTCCTCATGATATCAACACAAATTCAGGGTTTGAGGGGCACCATGGTAATGATGACAGT
GAAGATGACTGTCAAATAATGGAATGTACTCCAGCATACAAGTCTGATTTACCAGGAAAA
GAGCGGATGTCATCTGCTACTGCTTGTCATACTTTTGCTGGGCCTTCTGGTACTAATGGA
TTCTTGATAGATGAAAATGATGGCAGGCCAGGCTCTTCGTTGGATGGTCGTCGCTTATCT
TGCAAGAGAAAAGCACTTGAAGGACATCTGGGCCAATCTTCAGCAAGTGGAAGTAGAAAT
TATATTCCACATGCCGAAAACAGCTTATGGCATTCTCTACCTTCTCCACATAGTATGTGC
ACAGGTGCAAGTATCTGTGCTCCAACAGAAGGGAGCAGAAGCATCAATTTGTCAGAGCAG
CTTAACCCAAGACTTGGGCTTTCAATGGGAGGACCCACTTCAGAAAGTCCACTTCGTTTA
CCTGCTTCTGGACTTGCCGAAAGTTCCCGTAATACTTTCAGGCTGAGGGTTAATAGCTCA
CATCAACAGGATACCATTCCCAATAACCTGTTTCCTGCTGTGGCGGATGCTGGAAATGTT
ATTGTGTCATCTGACTGGCACTCATCAAGGGTCTTCCATAATAGTTCTTTGAATTTGATG
TCTATGTCTGCAGCAGATAATGTAAATCCTCAAAGCCAGGCCCCGGTGGTCCATGTTCCT
TCTCTGCATCGAAGTTCAGAGGCTAGGTGGGATTTAGCACCTAACTCGAGATCTAGCAGT
TCATCAAGCTTTTCTGCATCTAGAGAGAGAGACTCTGCACCATATCAAGAACCCCACTCA
AGAAGTTTGTCAAGGAACATTTCACAACATCCAATGTTTATACCTGCTACTGATGCAAGA
AATCTGAACCAAAATCCTGTCAACTGGAGTTTAGCTGGTGGTGGGAATATTTCCAGTGTT
GGAAATGTTGCATCCACATCTCGAAGTAGCTCGAGTTCACACTCCAACTTGTCTTCTCCT
TCTTGGGTTCAACACAGAAATCCTCCACAATATTCCCGGAGACTGTCTGAATATGTCCGA
AGGTCTTTGTTGTCTTCAGCTGATGCTGAACCTGGAGGTCATAGTGGTATTAGTCCTTCA
CTATGTCTGAGTGCTGCCTCTCGGGCGTTGGAACTTTCTGGCAATCATGGACATCGTCAA
TCAAGGTCAAGGTCCACAGCATTGTTGGAGAGACATCTTGATGGTGGTATTGGAGCTTCT
CATTCTAGAAGGACTTTGGCTTCTGCCAGTGAAGGAAGAAGCAGGCTAGTCTCTGAGATT
CGCAATGTATTGGATCTTATGCGCAGGGGAGAAGGCTTACAACTTGAGGATGTTATGATC
CTTGATCAGTCAGTCTTCTTTGGAACGGCGGATATTCATGATCGCCATAGGGATATGCGG
TTTGATGTTGATAACATGTCGTATGAGGAGTTACTGGCACTTGAAGAGCGCATTGGGAAT
GTGTGCACTGGACTGAGCGAAGAAGCTATTTTGTGCCAGTTGAAGCAGCACAGCTATATT
TGCGTTAAATCAGAAGAACCCATCGATGCAGAGCCATGCTCTATATGTCAGGAAGAATAT
AATGATGGAGAGGATCTTGGTACCCTGGAGTGTGGCCATGATTTTCATAGTGACTGCATT
AAACAATGGCTCAAACACAAGAATATATGCCCCATTTGCAAAACAACGGGGCTGAATACC
TGA

Peptide Sequence

PEP ID

XP_016470338.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana tabacum]
Sequence

MQGQQSTIGSFSETLDFGSTSTSGDGIDQQMCWNSRVPDYVVSPNENNISFLNPVSQERR
NIMGWGLGEPSSTNHAGQSERKRDHGWSSTMNAFPEPSHFSDEHQYGSPNILSLSNVEVN
LNSVQMANSSIFSQGSSPATLPHDINTNSGFEGHHGNDDSEDDCQIMECTPAYKSDLPGK
ERMSSATACHTFAGPSGTNGFLIDENDGRPGSSLDGRRLSCKRKALEGHLGQSSASGSRN
YIPHAENSLWHSLPSPHSMCTGASICAPTEGSRSINLSEQLNPRLGLSMGGPTSESPLRL
PASGLAESSRNTFRLRVNSSHQQDTIPNNLFPAVADAGNVIVSSDWHSSRVFHNSSLNLM
SMSAADNVNPQSQAPVVHVPSLHRSSEARWDLAPNSRSSSSSSFSASRERDSAPYQEPHS
RSLSRNISQHPMFIPATDARNLNQNPVNWSLAGGGNISSVGNVASTSRSSSSSHSNLSSP
SWVQHRNPPQYSRRLSEYVRRSLLSSADAEPGGHSGISPSLCLSAASRALELSGNHGHRQ
SRSRSTALLERHLDGGIGASHSRRTLASASEGRSRLVSEIRNVLDLMRRGEGLQLEDVMI
LDQSVFFGTADIHDRHRDMRFDVDNMSYEELLALEERIGNVCTGLSEEAILCQLKQHSYI
CVKSEEPIDAEPCSICQEEYNDGEDLGTLECGHDFHSDCIKQWLKHKNICPICKTTGLNT

Transcript Sequence

Gene sequence data has not been registered.